STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51220.12-oxoglutarate synthase. (350 aa)    
Predicted Functional Partners:
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
 
 0.999
AEI51123.1
Malic protein NAD-binding protein.
   
 0.946
AEI47200.1
Pyruvate kinase.
  
 0.929
AEI51935.1
methylmalonyl-CoA mutase, large subunit.
    
 0.928
AEI49876.1
succinyl-CoA synthetase, alpha subunit.
  
 
 0.924
AEI47197.1
Acetolactate synthase, large subunit, biosynthetic type.
  
 
 0.923
AEI50492.1
Succinyl-CoA ligase (ADP-forming) subunit beta.
    
 0.923
AEI46892.1
PEP-utilizing protein mobile region.
    
 0.920
AEI46893.1
Pyruvate, water dikinase.
    
 0.920
AEI49076.1
acetate/CoA ligase.
  
 
 0.919
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.