STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51233.1Hypothetical protein. (732 aa)    
Predicted Functional Partners:
AEI50556.1
Alpha-galactosidase.
 
  
 0.940
AEI48520.1
Beta-galactosidase.
  
 0.910
AEI51343.1
Aldose 1-epimerase.
  
 
 0.909
AEI49749.1
L-arabinose isomerase.
   
 
  0.907
AEI50181.1
Putative L-arabinose isomerase protein.
   
 
  0.900
AEI51229.1
RagB/SusD domain-containing protein.
 
     0.872
AEI51228.1
TonB-dependent receptor plug.
 
     0.825
AEI49183.1
Chondroitin AC lyase.
  
   
 0.775
AEI51232.1
Hypothetical protein.
       0.752
AEI48669.1
Hypothetical protein.
  
     0.717
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.