STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51309.1Octanoyltransferase. (238 aa)    
Predicted Functional Partners:
Runsl_4050
Lipoyl synthase.
 
 0.998
AEI51820.1
Beta-lactamase.
 
    
 0.915
AEI47166.1
3-oxoacyl-(acyl-carrier-protein) synthase 2.
    
 0.827
AEI51485.1
Enoyl-(acyl-carrier-protein) reductase (NADH).
     
  0.800
AEI48210.1
Glycine cleavage system H protein.
   
 0.762
AEI47165.1
Acyl carrier protein.
   
 0.717
AEI48413.1
Phosphopantetheine-binding protein.
   
 0.717
AEI51658.1
Dihydrolipoyllysine-residue succinyltransferase.
 
 
 0.617
AEI46685.1
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase.
 
 
 0.608
AEI51306.1
Hypothetical protein.
  
    0.608
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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