STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51318.1Hypothetical protein. (191 aa)    
Predicted Functional Partners:
AEI51317.1
Putative transcriptional regulator, Crp/Fnr family.
 
     0.888
AEI51319.1
Peptidase M16 domain protein.
       0.554
AEI51560.1
Tetratricopeptide TPR_2 repeat-containing protein.
  
     0.540
AEI50627.1
Hypothetical protein.
  
     0.526
AEI49475.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
     0.491
AEI48910.1
Xylose isomerase domain-containing protein TIM barrel.
  
     0.470
AEI51316.1
ThiJ/PfpI domain-containing protein.
       0.443
AEI47477.1
Hypothetical protein.
  
     0.436
AEI47656.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.