STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51383.1Fatty acid hydroxylase. (603 aa)    
Predicted Functional Partners:
AEI51890.1
Nitric oxide dioxygenase.
 
 
0.931
AEI51880.1
Enoyl-CoA hydratase/isomerase.
  
 
 0.909
AEI51384.1
Hypothetical protein.
       0.773
AEI48269.1
MOSC domain containing protein.
      0.552
Runsl_5077
Putative transcriptional regulator, Crp/Fnr family.
  
  
 0.522
AEI46923.1
Monooxygenase FAD-binding protein.
  
 
 0.510
AEI46963.1
FAD dependent oxidoreductase.
  
 
 0.456
AEI47814.1
Alkane 1-monooxygenase.
 
  
 0.437
AEI46970.1
4-hydroxybenzoate 3-monooxygenase.
  
 
 0.434
AEI46894.1
Linalool 8-monooxygenase.
 
 
 0.424
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.