STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51420.1Outer membrane adhesin like proteiin. (3144 aa)    
Predicted Functional Partners:
AEI49377.1
Conserved repeat domain protein.
  
  
  0.926
AEI49739.1
Conserved repeat domain protein.
  
  
  0.914
AEI51419.1
Conserved repeat domain protein.
 
     0.780
AEI51338.1
Conserved repeat domain protein.
  
     0.562
AEI51421.1
Hypothetical protein.
 
    
0.498
AEI51418.1
Hypothetical protein.
       0.449
Runsl_1357
Hypothetical protein.
  
 
   0.429
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.