STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51457.1thiamineS protein. (80 aa)    
Predicted Functional Partners:
AEI50768.1
Molybdopterin biosynthesis MoaE protein.
 
 0.999
AEI48941.1
UBA/THIF-type NAD/FAD binding protein.
 
 0.989
AEI48807.1
Molybdenum cofactor biosynthesis protein C.
 
  
 0.948
AEI50507.1
Molybdenum cofactor biosynthesis protein A.
 
  
 0.874
AEI47281.1
Cysteine synthase B.
  
 
 0.801
AEI47454.1
Molybdenum cofactor synthesis domain protein.
 
  
 0.767
AEI50833.1
Molybdenum cofactor synthesis domain protein.
  
  
 0.665
AEI48577.1
Molybdopterin-guanine dinucleotide biosynthesis protein A.
 
   
 0.612
AEI51456.1
Hydroxymethylglutaryl-CoA lyase.
     
 0.549
AEI48983.1
Nitrate reductase., Nitrite reductase (NAD(P)H).
  
  
 0.489
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.