STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51465.1Cyclomaltodextrinase. (624 aa)    
Predicted Functional Partners:
AEI49091.1
Major facilitator superfamily MFS_1.
 
  
 0.747
AEI50532.1
Trehalose synthase-fused maltokinase-like protein.
 
 
 0.652
AEI47707.1
Esterase.
     0.570
AEI51466.1
Transcriptional regulator, AraC family.
     
 0.543
AEI51467.1
HAD-superfamily hydrolase, subfamily IA, variant 3.
 
  
 0.535
AEI48188.1
Coagulation factor 5/8 type domain protein.
  
   
 0.507
AEI49970.1
Kojibiose phosphorylase.
 
  
 0.482
AEI50110.1
Beta-phosphoglucomutase.
 
  
 0.457
AEI46593.1
Starch synthase.
  
  
 0.444
AEI46528.1
Alpha amylase catalytic region.
 
   
 0.443
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.