STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51477.1Regulatory protein MarR. (151 aa)    
Predicted Functional Partners:
AEI47220.1
Mg-chelatase subunit ChlI-like protein.
  
     0.618
AEI51476.1
Hypothetical protein.
       0.571
AEI51478.1
YceI family protein.
       0.558
AEI51666.1
Hypothetical protein.
  
     0.543
AEI50137.1
Hypothetical protein.
  
     0.512
AEI50822.1
Hypothetical protein.
  
     0.486
AEI46654.1
LmbE family protein.
  
     0.476
AEI46733.1
Hypothetical protein.
  
     0.437
Runsl_0462
Hypothetical protein.
  
     0.427
AEI50703.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.