STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51492.1Putative signal transduction histidine kinase. (420 aa)    
Predicted Functional Partners:
AEI51493.1
Two component transcriptional regulator, LuxR family.
 
 
 0.923
Runsl_0960
Two component transcriptional regulator, LuxR family.
 
 
 0.836
AEI48839.1
Two component transcriptional regulator, LuxR family.
 
 
 0.836
AEI49250.1
Two component transcriptional regulator, LuxR family.
 
 
 0.835
AEI50460.1
Two component transcriptional regulator, LuxR family.
 
 
 0.835
AEI48786.1
Two component transcriptional regulator, LuxR family.
 
 
 0.832
AEI49639.1
Transcriptional regulator, LuxR family.
 
 
 0.830
AEI51278.1
ATP-dependent transcriptional regulator, MalT-like, LuxR family.
 
     0.743
AEI51491.1
Hypothetical protein.
       0.678
AEI46649.1
Hypothetical protein.
  
  
 0.459
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.