STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51501.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
AEI51503.1
OmpA/MotB domain protein.
 
   0.748
AEI51502.1
Hypothetical protein.
       0.664
AEI47754.1
Hypothetical protein.
  
     0.598
AEI51499.1
Hypothetical protein.
  
    0.594
AEI51498.1
Hypothetical protein.
       0.588
AEI51500.1
Hypothetical protein.
       0.588
AEI51504.1
KWG Leptospira repeat protein.
       0.556
AEI49598.1
Hypothetical protein.
  
     0.421
AEI51496.1
Hypothetical protein.
       0.417
AEI51497.1
Hypothetical protein.
       0.417
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.