STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51506.1Protein serine/threonine phosphatase. (529 aa)    
Predicted Functional Partners:
AEI49443.1
Transketolase domain-containing protein.
  
 0.926
AEI50086.1
Hypothetical protein.
   
 0.902
AEI46519.1
Methionyl-tRNA formyltransferase.
  
   0.868
AEI51495.1
Serine/threonine protein kinase.
 
 
 0.854
AEI51509.1
Forkhead-associated protein.
 
  
 0.833
AEI49455.1
Chaperone protein dnaJ.
  
 
 0.830
AEI49939.1
Histone deacetylase superfamily.
   
 
 0.823
AEI48776.1
WD40 repeat-containing protein.
  
 
 0.816
AEI51782.1
Major intrinsic protein.
    
 
 0.810
AEI51479.1
MORN repeat-containing protein.
    
   0.805
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.