STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51511.1ATPase AAA-2 domain protein. (834 aa)    
Predicted Functional Partners:
AEI48955.1
ATP-dependent Clp protease proteolytic subunit.
 
 
 0.906
AEI47136.1
Heat shock protein 70.
  
 
 0.896
AEI51312.1
Chaperone protein dnaK.
  
 
 0.896
AEI46540.1
ATP-dependent Clp protease adaptor protein ClpS.
  
 
 0.839
AEI49456.1
Protein grpE.
  
 
 0.832
AEI51512.1
Hypothetical protein.
       0.773
AEI51886.1
Heat shock protein Hsp90.
  
 
 0.768
AEI49048.1
Heat shock protein Hsp20.
 
 
 0.745
AEI49455.1
Chaperone protein dnaJ.
  
 
 0.717
AEI51167.1
Anti-sigma H sporulation factor, LonB.
  
 
 0.711
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.