STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51511.1ATPase AAA-2 domain protein. (834 aa)    
Predicted Functional Partners:
AEI48955.1
ATP-dependent Clp protease proteolytic subunit.
 
 0.961
AEI49455.1
Chaperone protein dnaJ.
  
 0.936
AEI47136.1
Heat shock protein 70.
  
 
 0.921
AEI51312.1
Chaperone protein dnaK.
  
 
 0.921
AEI46540.1
ATP-dependent Clp protease adaptor protein ClpS.
  
 
 0.873
AEI49456.1
Protein grpE.
  
 0.821
AEI51886.1
Heat shock protein Hsp90.
  
 
 0.780
AEI51512.1
Hypothetical protein.
       0.773
AEI51513.1
Hypothetical protein.
  
  
 0.768
AEI49048.1
Heat shock protein Hsp20.
 
 
 0.694
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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