STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51519.1GPW/gp25 family protein. (207 aa)    
Predicted Functional Partners:
AEI46463.1
Peptidoglycan-binding lysin domain protein.
  
 
 0.917
AEI46807.1
Hypothetical protein.
  
  
 0.863
AEI51517.1
Rhs element Vgr protein.
  
  
 0.793
AEI47388.1
Hypothetical protein.
  
  
 0.784
AEI51520.1
Hypothetical protein.
     
 0.745
AEI51518.1
Hypothetical protein.
       0.737
AEI51521.1
Hypothetical protein.
     
 0.715
AEI51523.1
Hypothetical protein.
     
 0.691
AEI51522.1
Hypothetical protein.
       0.677
AEI51524.1
PAAR repeat-containing protein.
  
    0.623
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.