STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51520.1Hypothetical protein. (607 aa)    
Predicted Functional Partners:
AEI51521.1
Hypothetical protein.
  
  
 0.815
AEI51523.1
Hypothetical protein.
  
  
 0.807
AEI51524.1
PAAR repeat-containing protein.
  
  
 0.758
AEI51519.1
GPW/gp25 family protein.
     
 0.745
AEI51522.1
Hypothetical protein.
     
 0.737
AEI51517.1
Rhs element Vgr protein.
  
  
 0.717
AEI51518.1
Hypothetical protein.
       0.654
AEI51513.1
Hypothetical protein.
  
  
 0.650
AEI51525.1
Hypothetical protein.
       0.535
AEI51526.1
Hypothetical protein.
       0.506
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.