STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51552.1PAS/PAC sensor signal transduction histidine kinase. (412 aa)    
Predicted Functional Partners:
AEI51553.1
Transcriptional regulator, Crp/Fnr family.
 
 0.993
AEI51730.1
Two component transcriptional regulator, AraC family.
 
 0.985
AEI49506.1
Two component transcriptional regulator, AraC family.
 
 0.979
AEI49505.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 0.977
AEI51729.1
Response regulator receiver sensor signal transduction histidine kinase.
 
 0.977
AEI49492.1
Response regulator receiver protein.
 
 0.974
AEI49491.1
Multi-sensor hybrid histidine kinase.
 
0.957
AEI51397.1
Multi-sensor hybrid histidine kinase.
 
 
0.954
AEI49757.1
Multi-sensor hybrid histidine kinase.
 
 
0.942
AEI49652.1
Multi-sensor hybrid histidine kinase.
 
 
0.937
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.