STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51556.1Glutaminyl-tRNA synthetase. (577 aa)    
Predicted Functional Partners:
AEI50500.1
Prolyl-tRNA synthetase.
 
 0.991
AEI48741.1
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.
  
 0.982
AEI48115.1
Ribosomal protein L14.
   
 0.969
AEI48123.1
Ribosomal protein L25/L23.
   
 0.968
AEI48109.1
Ribosomal protein L18.
   
 0.965
AEI48110.1
Ribosomal protein L6.
   
 0.965
AEI48113.1
Ribosomal protein L5.
   
 0.963
AEI49404.1
Glutamyl-tRNA(Gln) amidotransferase subunit A.
  
 0.956
AEI48124.1
Ribosomal protein L4/L1e.
  
 0.955
AEI48117.1
Ribosomal protein L29.
   
 0.954
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.