STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51610.1WbqC-like family protein. (208 aa)    
Predicted Functional Partners:
AEI46599.1
ATP synthase subunit delta.
  
 0.989
AEI46600.1
ATP synthase subunit b.
  
 0.989
AEI46601.1
ATP synthase subunit c.
  
 0.989
AEI46602.1
ATP synthase subunit a.
  
 0.989
AEI47383.1
ATP synthase subunit alpha.
  
 0.989
AEI48042.1
ATPase, F1 complex, delta/epsilon subunit.
  
 0.989
AEI48043.1
ATP synthase subunit beta.
  
 0.989
AEI47590.1
Ribosomal protein S2.
   
 
 0.903
AEI48244.1
DNA-directed RNA polymerase subunit beta.
   
 
 0.809
AEI48118.1
50S ribosomal protein L16.
  
 0.791
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.