STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51880.1Enoyl-CoA hydratase/isomerase. (260 aa)    
Predicted Functional Partners:
AEI51396.1
3-hydroxyacyl-CoA dehydrogenase.
 0.960
AEI51807.1
3-hydroxybutyryl-CoA epimerase.
0.932
AEI50659.1
Enoyl-CoA hydratase/isomerase.
  
  
 
0.924
AEI51890.1
Nitric oxide dioxygenase.
  
 
 0.920
AEI51383.1
Fatty acid hydroxylase.
  
 
 0.909
AEI49491.1
Multi-sensor hybrid histidine kinase.
  
 
 0.873
AEI47591.1
Ribosomal protein S9.
    
 0.868
AEI50439.1
30S ribosomal protein S16.
    
  0.866
AEI50969.1
Ribosomal protein S15.
    
 0.864
AEI48108.1
Ribosomal protein S5.
    
 0.863
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.