STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51906.1NIPSNAP family containing protein. (263 aa)    
Predicted Functional Partners:
AEI49200.1
Quinoprotein glucose dehydrogenase.
  
     0.564
AEI51331.1
Quinoprotein glucose dehydrogenase.
  
     0.560
AEI48967.1
Hypothetical protein.
  
     0.536
AEI51783.1
Quinoprotein glucose dehydrogenase.
  
     0.529
AEI51907.1
Transcriptional regulator, HxlR family.
       0.479
AEI50227.1
Oxidoreductase domain protein.
  
     0.456
AEI48314.1
Putative oxidoreductase.
  
     0.434
AEI50328.1
Hypothetical protein.
  
     0.426
AEI51779.1
Major facilitator superfamily MFS_1.
  
     0.422
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.