STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPTG_16428Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
PPTG_00689
RING-box protein 1A.
    
 0.754
PPTG_14550
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.709
PPTG_05481
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.709
PPTG_00209
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.709
PPTG_01021
Lipase_3 domain-containing protein.
    
 0.709
PPTG_13979
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.678
PPTG_20169
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.649
PPTG_20110
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.649
PPTG_12653
Uncharacterized protein.
    
 0.649
PPTG_09145
Skp1 domain-containing protein.
    
 0.649
Your Current Organism:
Phytophthora parasitica
NCBI taxonomy Id: 761204
Other names: P. parasitica INRA-310, Phytophthora parasitica INRA-310
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