STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPTG_23486N-acetyltransferase domain-containing protein. (468 aa)    
Predicted Functional Partners:
PPTG_13163
N-acetyltransferase domain-containing protein.
   
 
 0.853
PPTG_16590
Uncharacterized protein.
   
 0.801
PPTG_04971
SGF29 C-terminal domain-containing protein.
   
 0.801
PPTG_07335
CBFD_NFYB_HMF domain-containing protein.
    
 0.759
PPTG_06419
Uncharacterized protein.
    
 
 0.759
PPTG_01424
Uncharacterized protein.
    
 0.732
PPTG_18551
Uncharacterized protein.
   
 
 0.720
PPTG_23561
Uncharacterized protein.
   
 
 0.720
PPTG_14670
Uncharacterized protein.
   
 
 0.720
PPTG_01268
Uncharacterized protein.
   
 
 0.720
Your Current Organism:
Phytophthora parasitica
NCBI taxonomy Id: 761204
Other names: P. parasitica INRA-310, Phytophthora parasitica INRA-310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.