STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPTG_14031HIT-type domain-containing protein. (415 aa)    
Predicted Functional Partners:
PPTG_15671
Nop domain-containing protein.
   
 
 0.866
PPTG_08278
RNA helicase.
   
 
 0.701
PPTG_11242
Abhydrolase_2 domain-containing protein.
    
   0.670
PPTG_07887
Abhydrolase_2 domain-containing protein.
    
   0.670
PPTG_07934
Abhydrolase_2 domain-containing protein.
    
   0.670
PPTG_07935
Abhydrolase_2 domain-containing protein.
    
   0.670
PPTG_11744
Uncharacterized protein; Belongs to the BCP1 family.
   
  
 0.637
PPTG_04040
Uncharacterized protein.
   
    0.627
PPTG_14768
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.607
PPTG_11903
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.607
Your Current Organism:
Phytophthora parasitica
NCBI taxonomy Id: 761204
Other names: P. parasitica INRA-310, Phytophthora parasitica INRA-310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.