STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPTG_00812Uncharacterized protein. (638 aa)    
Predicted Functional Partners:
PPTG_13923
Uncharacterized protein.
    
 0.791
PPTG_13942
AMPKBI domain-containing protein.
    
  0.746
PPTG_13452
Histone H2B; Belongs to the histone H2B family.
    
  0.740
PPTG_10118
Histone H2B; Belongs to the histone H2B family.
    
  0.740
PPTG_16571
Histone H3; Belongs to the histone H3 family.
    
 0.694
PPTG_14870
Histone domain-containing protein.
    
 0.694
PPTG_02834
Histone H3; Belongs to the histone H3 family.
    
 0.694
PPTG_09323
Histone domain-containing protein.
    
 0.694
PPTG_21501
Uncharacterized protein.
    
 0.694
PPTG_04969
Histone H2A; Belongs to the histone H2A family.
    
  0.668
Your Current Organism:
Phytophthora parasitica
NCBI taxonomy Id: 761204
Other names: P. parasitica INRA-310, Phytophthora parasitica INRA-310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.