STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO47992.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)    
Predicted Functional Partners:
ALO47990.1
Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.827
ALO47765.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
ALO47991.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.703
ALO47989.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.621
ALO49319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
ALO48002.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
ALO48743.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
ALO49702.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
ALO49588.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
ALO47788.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.