STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO49812.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (898 aa)    
Predicted Functional Partners:
ALO48143.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.934
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.850
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
 
  
 0.768
ALO48002.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.755
ALO48743.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.755
ALO49702.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.755
ALO47788.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.749
ALO48000.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.747
ALO48741.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.740
ALO49700.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.740
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.