STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO48435.1DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
ALO49856.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.826
ALO48436.1
Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.677
AS203_04525
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.647
ALO48016.1
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.510
ALO48559.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
ALO48437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
ALO48309.1
Thiamine phosphate pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.