STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO48573.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (685 aa)    
Predicted Functional Partners:
ALO49872.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.846
ALO48575.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.785
ALO48574.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.655
ALO48572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
ALO49476.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
ALO48734.1
MxcH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.472
ALO49693.1
MxcH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.472
ALO48571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.422
ALO48586.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.415
ALO47820.1
DNA alkylation repair enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.