STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO49887.1Xanthan lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (851 aa)    
Predicted Functional Partners:
ALO48666.1
YgiQ family radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.802
ALO49886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
ALO47901.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.725
ALO49925.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.668
ALO48667.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.635
ALO48668.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.635
ALO48234.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.599
pfp
Diphosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
       0.527
AS203_03155
PcfJ-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.505
ALO47695.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.500
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.