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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO48858.1FMN-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)    
Predicted Functional Partners:
ALO48859.1
Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.
       0.715
lolD
Lipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
    0.684
ALO49377.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.664
ALO47949.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
ALO48403.1
Hemin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
ALO49860.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
ALO48856.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CvfB family.
       0.563
ALO47847.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
ALO48709.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.433
ALO49848.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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