STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO48966.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)    
Predicted Functional Partners:
ALO49795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
ALO49621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
pyrK
Diguanylate cyclase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
       0.582
pyrD
Diguanylate cyclase; Catalyzes the conversion of dihydroorotate to orotate.
       0.554
ALO48226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
ALO48388.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
ALO49365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
ALO49380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
ALO49790.1
Gliding motility lipoprotein GldH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.420
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.