STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO49925.1Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)    
Predicted Functional Partners:
ALO47901.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.975
ALO48975.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.897
ALO49887.1
Xanthan lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.668
ALO48159.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
ALO47900.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.548
ALO49219.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
ALO48795.1
Xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
ALO49546.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.422
secF
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
    0.414
ALO49274.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.