STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO49008.1Aerotolerance regulator BatD; Derived by automated computational analysis using gene prediction method: Protein Homology. (858 aa)    
Predicted Functional Partners:
ALO49006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.937
ALO49007.1
Aerotolerance regulator BatC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.937
ALO49003.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.916
ALO49005.1
Aerotolerance regulator BatA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.914
ALO49004.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.913
ALO49010.1
S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
  
    0.829
ALO49009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.826
ALO49929.1
DNA mismatch repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.788
ALO49002.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.739
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.