STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO49020.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)    
Predicted Functional Partners:
recF
DNA recombination protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
 
  
 0.865
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
       0.658
ALO49018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
ALO49930.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
ALO49016.1
DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
ALO49882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
ALO49711.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.439
ALO48960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
ALO48388.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
ALO48762.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.