STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALO49028.1Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)    
Predicted Functional Partners:
ALO49029.1
Peptidase C69; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
AS203_07990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
   
 0.500
ALO49149.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
ALO49491.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.478
ALO49567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.468
ALO47973.1
Nucleic acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.442
ALO47724.1
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
ALO48250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
ALO48578.1
Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Prevotella enoeca
NCBI taxonomy Id: 76123
Other names: ATCC 51261, CIP 104472, JCM 12259, NCTC 13068, P. enoeca, VPI D194A-25A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.