STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD04038.129 kDa antigen Cfp29. (265 aa)    
Predicted Functional Partners:
CQD04034.1
Dyp-type peroxidase family protein.
 
   
 0.981
apeB
Putative aminopeptidase 2.
       0.721
CQD04042.1
Short-chain dehydrogenase/reductase SDR.
       0.681
CQD04028.1
Glyoxalase.
       0.617
sseC
SseC.
      
 0.522
CQD19191.1
Peptidase; Belongs to the peptidase S8 family.
      
 0.468
CQD10293.1
Esat-6 like protein EsxE; Belongs to the WXG100 family.
      
 0.418
CQD05738.1
proX.
      
 0.405
Your Current Organism:
Mycobacterium europaeum
NCBI taxonomy Id: 761804
Other names: CCUG 58464, DSM 45397, M. europaeum, Mycobacterium europaeum Tortoli et al. 2011, Mycobacterium sp. DSM 45397, Mycobacterium sp. FI-06004, Mycobacterium sp. FI-09129, Mycobacterium sp. FI-09261, strain FI-95228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.