STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD08740.1long-chain-fatty-acid--CoA ligase. (505 aa)    
Predicted Functional Partners:
CQD14703.1
Syringomycin synthetase.
 
 0.883
CQD22894.1
Linear gramicidin synthetase subunit B.
  
0.883
CQD12335.1
Fatty acid synthase.
  
 
 0.839
CQD08745.1
enoyl-CoA hydratase/isomerase family protein.
  
   0.830
CQD11898.1
Tylactone synthase modules 4 & 5.
 
 0.827
CQD13380.1
Mycocerosic acid synthase.
  
 0.827
CQD20060.1
Acyl transferase domain-containing protein.
  
 0.827
CQD05985.1
Polyketide synthase.
  
 0.801
CQD15193.1
RifB protein.
 
 0.801
CQD15198.1
Erythronolide synthase, modules 3 and 4.
 
 0.801
Your Current Organism:
Mycobacterium europaeum
NCBI taxonomy Id: 761804
Other names: CCUG 58464, DSM 45397, M. europaeum, Mycobacterium europaeum Tortoli et al. 2011, Mycobacterium sp. DSM 45397, Mycobacterium sp. FI-06004, Mycobacterium sp. FI-09129, Mycobacterium sp. FI-09261, strain FI-95228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.