STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD09919.1Tuberculin-like protein. (158 aa)    
Predicted Functional Partners:
CQD09915.1
Fis family transcriptional regulator.
  
    0.833
CQD09924.1
Superoxide dismutase, Cu-Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
       0.830
CQD09930.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
       0.830
CQD09935.1
ATP-dependent protease La.
       0.830
CQD21752.1
Secreted alanine rich protein.
  
   
 0.817
CQD09944.1
echA8_2.
       0.798
CQD22748.1
Hypothetical protein.
  
     0.762
CQD15064.1
Hypothetical protein.
  
     0.760
CQD21660.1
Transmembrane protein.
  
     0.759
CQD02544.1
Transmembrane protein.
  
     0.754
Your Current Organism:
Mycobacterium europaeum
NCBI taxonomy Id: 761804
Other names: CCUG 58464, DSM 45397, M. europaeum, Mycobacterium europaeum Tortoli et al. 2011, Mycobacterium sp. DSM 45397, Mycobacterium sp. FI-06004, Mycobacterium sp. FI-09129, Mycobacterium sp. FI-09261, strain FI-95228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.