Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD06248.1 | CQD09704.1 | BN000_01238 | BN000_01983 | Ferredoxin-dependent glutamate synthase 1. | Beta-ketoacyl synthase. | 0.924 |
CQD06248.1 | CQD17037.1 | BN000_01238 | BN000_03658 | Ferredoxin-dependent glutamate synthase 1. | Erythronolide synthase, modules 3 and 4. | 0.926 |
CQD06248.1 | CQD20169.1 | BN000_01238 | BN000_04800 | Ferredoxin-dependent glutamate synthase 1. | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein. | 0.988 |
CQD06248.1 | guaA | BN000_01238 | BN000_04504 | Ferredoxin-dependent glutamate synthase 1. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.984 |
CQD06248.1 | nadE | BN000_01238 | BN000_02516 | Ferredoxin-dependent glutamate synthase 1. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.938 |
CQD09704.1 | CQD06248.1 | BN000_01983 | BN000_01238 | Beta-ketoacyl synthase. | Ferredoxin-dependent glutamate synthase 1. | 0.924 |
CQD09704.1 | CQD17037.1 | BN000_01983 | BN000_03658 | Beta-ketoacyl synthase. | Erythronolide synthase, modules 3 and 4. | 0.999 |
CQD09704.1 | CQD20169.1 | BN000_01983 | BN000_04800 | Beta-ketoacyl synthase. | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein. | 0.950 |
CQD09704.1 | guaA | BN000_01983 | BN000_04504 | Beta-ketoacyl synthase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.648 |
CQD09704.1 | nadE | BN000_01983 | BN000_02516 | Beta-ketoacyl synthase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.915 |
CQD16405.1 | cobB | BN000_03473 | BN000_02518 | Competence damage-inducible protein A; Belongs to the CinA family. | Sir2-like regulatory protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.563 |
CQD16405.1 | cobB-2 | BN000_03473 | BN000_02923 | Competence damage-inducible protein A; Belongs to the CinA family. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.563 |
CQD16405.1 | nadD | BN000_03473 | BN000_02508 | Competence damage-inducible protein A; Belongs to the CinA family. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.953 |
CQD16405.1 | nadE | BN000_03473 | BN000_02516 | Competence damage-inducible protein A; Belongs to the CinA family. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.971 |
CQD16405.1 | ppnK | BN000_03473 | BN000_03180 | Competence damage-inducible protein A; Belongs to the CinA family. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.675 |
CQD17037.1 | CQD06248.1 | BN000_03658 | BN000_01238 | Erythronolide synthase, modules 3 and 4. | Ferredoxin-dependent glutamate synthase 1. | 0.926 |
CQD17037.1 | CQD09704.1 | BN000_03658 | BN000_01983 | Erythronolide synthase, modules 3 and 4. | Beta-ketoacyl synthase. | 0.999 |
CQD17037.1 | CQD20169.1 | BN000_03658 | BN000_04800 | Erythronolide synthase, modules 3 and 4. | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein. | 0.958 |
CQD17037.1 | guaA | BN000_03658 | BN000_04504 | Erythronolide synthase, modules 3 and 4. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.423 |
CQD17037.1 | nadE | BN000_03658 | BN000_02516 | Erythronolide synthase, modules 3 and 4. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.915 |
page 1 of 3