STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD21634.1Putative membrane alanine rich protein. (251 aa)    
Predicted Functional Partners:
CQD21632.1
35kd antigen.
  
  
 0.848
CQD21629.1
DNA-binding protein.
     
 0.797
CQD03971.1
Hypothetical protein.
  
     0.769
CQD07210.1
Proline-rich 28 kDa antigen.
  
     0.765
CQD14904.1
Putative transmembrane protein.
  
     0.765
CQD17213.1
LppL protein.
  
     0.765
CQD02619.1
34 kDa antigenic protein.
  
     0.760
CQD19199.1
Putative alanine and valine rich protein.
  
     0.758
CQD22748.1
Hypothetical protein.
  
     0.755
CQD21694.1
LysM domain-containing protein.
  
     0.751
Your Current Organism:
Mycobacterium europaeum
NCBI taxonomy Id: 761804
Other names: CCUG 58464, DSM 45397, M. europaeum, Mycobacterium europaeum Tortoli et al. 2011, Mycobacterium sp. DSM 45397, Mycobacterium sp. FI-06004, Mycobacterium sp. FI-09129, Mycobacterium sp. FI-09261, strain FI-95228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.