STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RR48_04376RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (410 aa)    
Predicted Functional Partners:
RR48_03012
DNA-directed RNA polymerase II subunit RPB7.
    
 0.942
RR48_12101
DNA-directed RNA polymerase II subunit RPB3.
    
 0.942
RR48_06640
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.941
RR48_02632
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.929
RR48_14169
General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.
    
 0.928
RR48_04377
RNA polymerase II subunit A C-terminal domain phosphatase.
 
     0.927
RR48_01271
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
    
 0.915
RR48_14661
DNA-directed RNA polymerase II subunit RPB11.
    
 0.890
RR48_13358
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 0.887
RR48_07770
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.875
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.