Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RR48_01953 | RR48_03170 | A0A0N0PCP0 | A0A0N1I8I1 | Putative ATP-dependent RNA helicase DDX56. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.700 |
RR48_01953 | RR48_05902 | A0A0N0PCP0 | A0A0N0PD83 | Putative ATP-dependent RNA helicase DDX56. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. | 0.571 |
RR48_01953 | RR48_11762 | A0A0N0PCP0 | A0A194QP13 | Putative ATP-dependent RNA helicase DDX56. | RNA helicase. | 0.963 |
RR48_01953 | RR48_13034 | A0A0N0PCP0 | A0A194QTG6 | Putative ATP-dependent RNA helicase DDX56. | U3 small nucleolar RNA-interacting protein 2. | 0.939 |
RR48_02293 | RR48_02954 | A0A0N0PCN0 | A0A0N1PFG0 | 116 kDa U5 small nuclear ribonucleoprotein component. | DPH3-like. | 0.524 |
RR48_02293 | RR48_03170 | A0A0N0PCN0 | A0A0N1I8I1 | 116 kDa U5 small nuclear ribonucleoprotein component. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.645 |
RR48_02293 | RR48_05902 | A0A0N0PCN0 | A0A0N0PD83 | 116 kDa U5 small nuclear ribonucleoprotein component. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. | 0.645 |
RR48_02293 | RR48_12047 | A0A0N0PCN0 | A0A194RLA3 | 116 kDa U5 small nuclear ribonucleoprotein component. | Diphthine synthase. | 0.580 |
RR48_02954 | RR48_02293 | A0A0N1PFG0 | A0A0N0PCN0 | DPH3-like. | 116 kDa U5 small nuclear ribonucleoprotein component. | 0.524 |
RR48_02954 | RR48_03170 | A0A0N1PFG0 | A0A0N1I8I1 | DPH3-like. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 0.983 |
RR48_02954 | RR48_05107 | A0A0N1PFG0 | A0A0N0PB45 | DPH3-like. | Elongation factor Tu GTP-binding domain-containing protein 1. | 0.524 |
RR48_02954 | RR48_05902 | A0A0N1PFG0 | A0A0N0PD83 | DPH3-like. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. | 0.982 |
RR48_02954 | RR48_09558 | A0A0N1PFG0 | A0A194QYQ6 | DPH3-like. | Translation elongation factor 2. | 0.917 |
RR48_02954 | RR48_12047 | A0A0N1PFG0 | A0A194RLA3 | DPH3-like. | Diphthine synthase. | 0.676 |
RR48_02954 | RR48_14619 | A0A0N1PFG0 | A0A194QKW9 | DPH3-like. | DPH4-like. | 0.577 |
RR48_03170 | RR48_01953 | A0A0N1I8I1 | A0A0N0PCP0 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | Putative ATP-dependent RNA helicase DDX56. | 0.700 |
RR48_03170 | RR48_02293 | A0A0N1I8I1 | A0A0N0PCN0 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 116 kDa U5 small nuclear ribonucleoprotein component. | 0.645 |
RR48_03170 | RR48_02954 | A0A0N1I8I1 | A0A0N1PFG0 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | DPH3-like. | 0.983 |
RR48_03170 | RR48_05107 | A0A0N1I8I1 | A0A0N0PB45 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | Elongation factor Tu GTP-binding domain-containing protein 1. | 0.645 |
RR48_03170 | RR48_05902 | A0A0N1I8I1 | A0A0N0PD83 | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. | 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. | 0.990 |
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