STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR48_04815Vacuolar protein sorting-associated protein 11-like. (736 aa)    
Predicted Functional Partners:
RR48_04748
Vacuolar protein sorting-associated protein 41-like.
   
 0.952
RR48_07138
Vacuolar protein sorting-associated protein 18-like.
   
 0.951
RR48_10547
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 0.950
RR48_07602
Vacuolar protein sorting-associated protein 8-like.
    
 
 0.932
RR48_12253
Vacuolar fusion protein CCZ1-like.
    
 
 0.929
RR48_11686
Ras-related protein Rab-9B.
    
 
 0.928
RR48_08277
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.927
RR48_10476
Vesicle transport through interaction with t-SNAREs-like 1A.
    
 
 0.924
RR48_04236
Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.918
RR48_08716
Vam6/Vps39-like protein.
   
 0.915
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.