STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR48_03513CCAAT/enhancer-binding protein zeta. (932 aa)    
Predicted Functional Partners:
RR48_14166
Nucleolar complex protein 2-like.
   
 
 0.998
RR48_13870
Protein RRP5-like.
   
 
 0.998
RR48_01953
Putative ATP-dependent RNA helicase DDX56.
   
 
 0.994
RR48_03807
RNA-binding protein 34.
   
 
 0.992
RR48_14657
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.992
RR48_11835
Ribosome production factor 2-like.
   
 
 0.991
RR48_14462
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
 
 0.986
RR48_05405
RRP12-like protein.
   
 
 0.984
RR48_05683
Ribosome biogenesis protein BOP1-like.
   
 
 0.982
RR48_03239
RNA-binding protein 28.
   
 
 0.981
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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