Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RR48_01953 | RR48_03239 | A0A0N0PCP0 | A0A0N1I4L9 | Putative ATP-dependent RNA helicase DDX56. | RNA-binding protein 28. | 0.918 |
RR48_01953 | RR48_03513 | A0A0N0PCP0 | A0A0N1PHQ8 | Putative ATP-dependent RNA helicase DDX56. | CCAAT/enhancer-binding protein zeta. | 0.994 |
RR48_01953 | RR48_03807 | A0A0N0PCP0 | A0A0N1PFV2 | Putative ATP-dependent RNA helicase DDX56. | RNA-binding protein 34. | 0.980 |
RR48_01953 | RR48_05405 | A0A0N0PCP0 | A0A0N0PC57 | Putative ATP-dependent RNA helicase DDX56. | RRP12-like protein. | 0.839 |
RR48_01953 | RR48_05683 | A0A0N0PCP0 | A0A0N1IH12 | Putative ATP-dependent RNA helicase DDX56. | Ribosome biogenesis protein BOP1-like. | 0.978 |
RR48_01953 | RR48_11835 | A0A0N0PCP0 | A0A194QMM5 | Putative ATP-dependent RNA helicase DDX56. | Ribosome production factor 2-like. | 0.996 |
RR48_01953 | RR48_13870 | A0A0N0PCP0 | A0A194RHU9 | Putative ATP-dependent RNA helicase DDX56. | Protein RRP5-like. | 0.929 |
RR48_01953 | RR48_14166 | A0A0N0PCP0 | A0A194QLL6 | Putative ATP-dependent RNA helicase DDX56. | Nucleolar complex protein 2-like. | 0.975 |
RR48_01953 | RR48_14462 | A0A0N0PCP0 | A0A194QM34 | Putative ATP-dependent RNA helicase DDX56. | MKI67 FHA domain-interacting nucleolar phosphoprotein-like. | 0.935 |
RR48_01953 | RR48_14657 | A0A0N0PCP0 | A0A194QMM8 | Putative ATP-dependent RNA helicase DDX56. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.976 |
RR48_03239 | RR48_01953 | A0A0N1I4L9 | A0A0N0PCP0 | RNA-binding protein 28. | Putative ATP-dependent RNA helicase DDX56. | 0.918 |
RR48_03239 | RR48_03513 | A0A0N1I4L9 | A0A0N1PHQ8 | RNA-binding protein 28. | CCAAT/enhancer-binding protein zeta. | 0.981 |
RR48_03239 | RR48_03807 | A0A0N1I4L9 | A0A0N1PFV2 | RNA-binding protein 28. | RNA-binding protein 34. | 0.957 |
RR48_03239 | RR48_05405 | A0A0N1I4L9 | A0A0N0PC57 | RNA-binding protein 28. | RRP12-like protein. | 0.979 |
RR48_03239 | RR48_05683 | A0A0N1I4L9 | A0A0N1IH12 | RNA-binding protein 28. | Ribosome biogenesis protein BOP1-like. | 0.901 |
RR48_03239 | RR48_11835 | A0A0N1I4L9 | A0A194QMM5 | RNA-binding protein 28. | Ribosome production factor 2-like. | 0.966 |
RR48_03239 | RR48_13870 | A0A0N1I4L9 | A0A194RHU9 | RNA-binding protein 28. | Protein RRP5-like. | 0.928 |
RR48_03239 | RR48_14166 | A0A0N1I4L9 | A0A194QLL6 | RNA-binding protein 28. | Nucleolar complex protein 2-like. | 0.973 |
RR48_03239 | RR48_14462 | A0A0N1I4L9 | A0A194QM34 | RNA-binding protein 28. | MKI67 FHA domain-interacting nucleolar phosphoprotein-like. | 0.990 |
RR48_03239 | RR48_14657 | A0A0N1I4L9 | A0A194QMM8 | RNA-binding protein 28. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.965 |
page 1 of 6