STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR48_04893Uncharacterized protein. (53 aa)    
Predicted Functional Partners:
RR48_10764
U7 snRNA-associated Sm-like protein LSm10.
     
 0.923
RR48_03927
Small nuclear ribonucleoprotein Sm D3.
    
 0.890
RR48_11619
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.884
RR48_02600
Small nuclear ribonucleoprotein-associated protein B.
    
 0.842
RR48_01363
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
     
 0.832
RR48_08440
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.812
RR48_08302
PID domain-containing protein.
    
 0.812
RR48_02706
Uncharacterized protein.
    
 0.787
RR48_07549
LSM domain-containing protein 1.
    
 0.782
RR48_06461
Small nuclear ribonucleoprotein Sm D2.
      
 0.672
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
Server load: low (12%) [HD]