STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR48_04119annotation not available (694 aa)    
Predicted Functional Partners:
RR48_04221
E3 ubiquitin-protein ligase TRIM33.
   
 
 0.886
RR48_07413
DNA mismatch repair protein Msh2.
   
 
 0.855
RR48_11609
Exonuclease 1.
    
 
 0.747
RR48_02805
DNA2-like helicase.
    
 
 0.575
RR48_12263
High mobility group protein 20A.
   
  
 0.510
RR48_03080
Histone H2A deubiquitinase MYSM1.
   
 
 0.483
RR48_07588
ATP-dependent DNA helicase Q4.
   
 
 0.449
RR48_13540
Bloom syndrome protein-like.
   
 
 0.449
RR48_13542
Bloom syndrome protein.
   
 
 0.449
RR48_12019
C-1-tetrahydrofolate synthase, cytoplasmic.
   
   0.413
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.