STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR48_14561tRNA-dihydrouridine synthase 1-like. (455 aa)    
Predicted Functional Partners:
RR48_11075
WD repeat-containing protein 36.
   
   0.930
RR48_10749
Bystin.
   
    0.812
RR48_02291
Putative ribosome production factor 1.
   
    0.809
RR48_13036
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.800
RR48_14840
DDB1-and CUL4-associated factor 13.
   
    0.798
RR48_03671
tRNA guanosine-2'-O-methyltransferase TRM11-like.
   
  
 0.788
RR48_03670
tRNA guanosine-2'-O-methyltransferase TRM11-like.
   
  
 0.788
RR48_14166
Nucleolar complex protein 2-like.
   
    0.775
RR48_12190
WD repeat-containing protein 75.
   
    0.747
RR48_10245
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.736
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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