STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RR48_14561tRNA-dihydrouridine synthase 1-like. (455 aa)    
Predicted Functional Partners:
RR48_03671
tRNA guanosine-2'-O-methyltransferase TRM11-like.
   
  
 0.857
RR48_03670
tRNA guanosine-2'-O-methyltransferase TRM11-like.
   
  
 0.857
RR48_12211
Putative methyltransferase NSUN6.
   
  
 0.835
RR48_11075
WD repeat-containing protein 36.
   
    0.834
RR48_09977
FAD synthase.
   
 
 0.796
RR48_02291
Putative ribosome production factor 1.
   
    0.790
RR48_10749
Bystin.
   
    0.788
RR48_14840
DDB1-and CUL4-associated factor 13.
   
    0.786
wuho
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wuho; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.784
RR48_03314
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
   0.780
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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