STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR48_11762RNA helicase. (952 aa)    
Predicted Functional Partners:
RR48_09393
Putative ATP-dependent RNA helicase DDX52; Belongs to the DEAD box helicase family.
  
0.976
RR48_14166
Nucleolar complex protein 2-like.
   
 
 0.966
RR48_02497
ATP-dependent RNA helicase DDX24.
  
 
0.964
RR48_05683
Ribosome biogenesis protein BOP1-like.
   
 0.964
RR48_01953
Putative ATP-dependent RNA helicase DDX56.
  
  
0.963
RR48_14558
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.963
RR48_05734
RNA helicase.
  
  
0.959
RR48_03796
Uncharacterized protein.
   
 0.958
RR48_03807
RNA-binding protein 34.
   
 0.956
RR48_14657
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.956
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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