STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RR48_11793Circadian clock-controlled protein. (237 aa)    
Predicted Functional Partners:
RR48_08357
Ran-specific GTPase-activating protein.
   
 
  0.557
RR48_01574
Histone chaperone asf1.
    
 0.426
RR48_02592
Uncharacterized protein.
   
 0.424
RR48_02593
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.424
RR48_03017
Nucleoporin GLE1.
    
 0.416
RR48_02103
40S ribosomal protein S28.
   
   0.407
RR48_14707
ADP-ribosylation factor-like protein 6-interacting protein 1.
   
   0.401
RR48_09094
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
   0.401
Your Current Organism:
Papilio machaon
NCBI taxonomy Id: 76193
Other names: Old World swallowtail, P. machaon, artemisia swallowtail, common yellow swallowtail
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.