Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RR48_05491 | RR48_07831 | A0A0N1IQ68 | A0A194QYU9 | Methenyltetrahydrofolate synthase domain-containing protein. | Rhomboid-related protein 3; Belongs to the peptidase S54 family. | 0.417 |
RR48_05491 | RR48_13171 | A0A0N1IQ68 | A0A194QVN7 | Methenyltetrahydrofolate synthase domain-containing protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.530 |
RR48_06589 | RR48_07831 | A0A194RIY0 | A0A194QYU9 | Protein hunchback. | Rhomboid-related protein 3; Belongs to the peptidase S54 family. | 0.410 |
RR48_07831 | RR48_05491 | A0A194QYU9 | A0A0N1IQ68 | Rhomboid-related protein 3; Belongs to the peptidase S54 family. | Methenyltetrahydrofolate synthase domain-containing protein. | 0.417 |
RR48_07831 | RR48_06589 | A0A194QYU9 | A0A194RIY0 | Rhomboid-related protein 3; Belongs to the peptidase S54 family. | Protein hunchback. | 0.410 |
RR48_07831 | RR48_13171 | A0A194QYU9 | A0A194QVN7 | Rhomboid-related protein 3; Belongs to the peptidase S54 family. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.417 |
RR48_13171 | RR48_05491 | A0A194QVN7 | A0A0N1IQ68 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Methenyltetrahydrofolate synthase domain-containing protein. | 0.530 |
RR48_13171 | RR48_07831 | A0A194QVN7 | A0A194QYU9 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Rhomboid-related protein 3; Belongs to the peptidase S54 family. | 0.417 |